bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: LCLAT1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LCLAT1 0 1.767 -0.520 1.020 0.417 0.518

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LCLAT1 Ubiquitylation K306 -0.188 _EDLQLWCHK(gl)R_
LCLAT1 Ubiquitylation K221 -0.448 _SNAFAEK(gl)NGLQK_

Background Information for LCLAT1:


Pubmed-LCLAT1 »
Uniprot-LCLAT1 »
Biogrid-LCLAT1 »
ProteomicsDB-LCLAT1 »

Tumorportal-LCLAT1 »
COSMIC-LCLAT1 »
GenomeRNAi-LCLAT1 »
Genecards-LCLAT1


Protein-protein Interactions for LCLAT1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ADAM2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ADAM21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ADAM30 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ADAM32 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ATP2B2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRND Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CLEC2D Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DLK2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM134C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FRMD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GABRG2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR114 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IPPK Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRRT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC4A8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LCLAT1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Plipid/glycerol_acylTrfase IPR002123 0.17


Protein complexes (CORUM database) featuring LCLAT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LCLAT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members Pathway Pathway_71 KEGG_GLYCEROLIPID_METABOLISM 0 0.45
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0007275 multicellular organismal development Database 0.31
Category members GO Category GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity Database 0.25
Category members GO Category GO:0016024 CDP-diacylglycerol biosynthetic process Database 0.24
Category members Pathway Pathway_1 REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM 0 0.23
Category members GO Category GO:0016746 transferase activity, transferring acyl groups Database 0.17
Category members Pathway Pathway_2 REACTOME_TRIGLYCERIDE_BIOSYNTHESIS 0 0.08
Category members Pathway Pathway_100 REACTOME_PHOSPHOLIPID_METABOLISM 0 0
Category members Pathway Pathway_161 REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS 0 0
Category members Pathway Pathway_276 KEGG_GLYCEROPHOSPHOLIPID_METABOLISM 0 0
Category members Pathway Pathway_4 REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS 0 0
Category members Pathway Pathway_482 REACTOME_SYNTHESIS_OF_PA 0 0
Category members GO Category GO:0006644 phospholipid metabolic process Database 0
Category members GO Category GO:0006654 phosphatidic acid biosynthetic process Database 0
Category members GO Category GO:0008152 metabolic process Database 0
Category members GO Category GO:0019432 triglyceride biosynthetic process Database 0
Category members GO Category GO:0035965 cardiolipin acyl-chain remodeling Database 0
Category members GO Category GO:0044255 cellular lipid metabolic process Database 0
Category members GO Category GO:0046474 glycerophospholipid biosynthetic process Database 0


.

© Copyright Svejstrup Laboratory 2015