bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: KHDRBS2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
KHDRBS2 0 -1.257 0.670 -0.480
KHDRBS2 0 -1.257 0.670 -0.480 -0.648 -1.258 -0.381 -0.646 -0.079

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
KHDRBS2 Ubiquitylation K169 -0.739 0.728 _QYPK(gl)FNFVGK_
KHDRBS2 Ubiquitylation K165 -0.612 0.332 _VLIPVK(gl)QYPK_

Background Information for KHDRBS2:





Protein-protein Interactions for KHDRBS2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CAPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KHDRBS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SUZ12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in KHDRBS2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members KH_dom IPR004087 0.23
Category members KH_dom_type_1 IPR004088 0.13


Protein complexes (CORUM database) featuring KHDRBS2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring KHDRBS2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0008143 poly(A) RNA binding Database 0.44
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0008266 poly(U) RNA binding Database 0
Category members GO Category GO:0017124 SH3 domain binding Database 0
Category members GO Category GO:0042169 SH2 domain binding Database 0


© Copyright Svejstrup Laboratory 2015