bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: KATNA1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
KATNA1 1 4.609 -1.910 4.710

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
KATNA1 Phosphorylation S170 -0.150 0.049 _NKS(ph)PAAVTEPETNK_

Background Information for KATNA1:





Protein-protein Interactions for KATNA1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KATNA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait ARIH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ASB3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C15orf29 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait INPP5K Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PFDN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in KATNA1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members DNA_helicase_Holl-junc_RuvB_N IPR008824 1.05
Category members AAA+_ATPase IPR003593 0.38
Category members ATPase_AAA_core IPR003959 0.14
Category members Vps4_C IPR015415 0.02


Protein complexes (CORUM database) featuring KATNA1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring KATNA1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006281 DNA repair Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0006310 DNA recombination Database 3.14
Category members GO Category GO:0016887 ATPase activity Database 2.28
Category members GO Category GO:0007067 mitosis Database 2.23
Category members GO Category GO:0006200 ATP catabolic process Database 2.13
Category members GO Category GO:0030426 growth cone Database 1.61
Category members Pathway Pathway_729 PID_LIS1_PATHWAY 0 1.41
Category members GO Category GO:0005874 microtubule Database 1.21
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0009378 four-way junction helicase activity Database 1.06
Category members GO Category GO:0008017 microtubule binding Database 0.79
Category members GO Category GO:0005813 centrosome Database 0.75
Category members GO Category GO:0008104 protein localization Database 0.5
Category members GO Category GO:0017111 nucleoside-triphosphatase activity Database 0.5
Category members GO Category GO:0001578 microtubule bundle formation Database 0.49
Category members GO Category GO:0005819 spindle Database 0.41
Category members GO Category GO:0030496 midbody Database 0.39
Category members GO Category GO:0000922 spindle pole Database 0.35
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28
Category members GO Category GO:0030424 axon Database 0.23
Category members GO Category GO:0045502 dynein binding Database 0.04
Category members GO Category GO:0010977 negative regulation of neuron projection development Database 0.04
Category members GO Category GO:0001764 neuron migration Database 0
Category members GO Category GO:0005811 lipid particle Database 0
Category members GO Category GO:0008568 microtubule-severing ATPase activity Database 0
Category members GO Category GO:0031122 cytoplasmic microtubule organization Database 0
Category members GO Category GO:0043025 neuronal cell body Database 0
Category members GO Category GO:0051013 microtubule severing Database 0
Category members GO Category GO:0051329 mitotic interphase Database 0


© Copyright Svejstrup Laboratory 2015