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Query: GANAB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GANAB 0 5.919 -1.570 1.920 -0.067
GANAB 0 5.919 -1.570 1.920 0.976 1.372 -0.855 0.380 0.462

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GANAB Ubiquitylation K99 0.296 1.368 _TCEESSFCK(gl)R_
GANAB Ubiquitylation K542 0.522 _NLGLYVK(gl)TR_
GANAB Ubiquitylation K320 -0.200 0.127 _LK(gl)VTEGGEPYR_

Background Information for GANAB:


Pubmed-GANAB »
Uniprot-GANAB »
Biogrid-GANAB »
ProteomicsDB-GANAB »

Tumorportal-GANAB »
COSMIC-GANAB »
GenomeRNAi-GANAB »
Genecards-GANAB


Protein-protein Interactions for GANAB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCDC88A Cat. description Hein, Mann, Cell 2015
Category members IP bait LGALS3BP Cat. description Hein, Mann, Cell 2015
Category members IP bait MGP Cat. description Hein, Mann, Cell 2015
Category members IP bait NIPSNAP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PRMT7 Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBG1 Cat. description Hein, Mann, Cell 2015
Category members IP bait XPO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait GANAB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HSPA8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GANAB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Glyco_hydro_31 IPR000322 0.08
Category members Gal_mutarotase_SF_dom IPR011013 0
Category members Glycoside_hydrolase_SF IPR017853 0


Protein complexes (CORUM database) featuring GANAB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GANAB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members GO Category GO:0042470 melanosome Database 5.59
Category members GO Category GO:0006457 protein folding Database 4.93
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members Pathway Pathway_109 KEGG_N_GLYCAN_BIOSYNTHESIS 0 0.04
Category members Pathway Pathway_464 REACTOME_N_GLYCAN_TRIMMING_IN_THE_ER_AND_CALNEXIN_CALRETICULIN_CYCLE 0 0
Category members Pathway Pathway_465 REACTOME_CALNEXIN_CALRETICULIN_CYCLE 0 0
Category members Pathway Pathway_94 REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION 0 0
Category members Pathway Pathway_95 REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION 0 0
Category members GO Category GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Database 0
Category members GO Category GO:0005788 endoplasmic reticulum lumen Database 0
Category members GO Category GO:0018279 protein N-linked glycosylation via asparagine Database 0
Category members GO Category GO:0030246 carbohydrate binding Database 0
Category members GO Category GO:0043687 post-translational protein modification Database 0


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