bioLOGIC-db

bioLOGIC Data

Query: FMR1

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
FMR1	0	2.645				-0.041	0.382	-0.062	0.362
FMR1	0	2.645			0.713			-0.183	-0.136

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
FMR1	Phosphorylation	S601	0.394	0.422	_TDGS(ph)ISGDRQPVTVADYISR_
FMR1	Phosphorylation	T598	0.270		_T(ph)DGSISGDRQPVTVADYISR_
FMR1	Ubiquitylation	K207	0.059		_NEEASK(gl)QLESSR_
FMR1	Ubiquitylation	K310	0.475		_LIQEIVDK(gl)SGVVR_
FMR1	Ubiquitylation	K372	-0.085		_ENSTHFSQPNSTK(gl)VQR_

Pubmed-FMR1 »

ProteomicsDB-FMR1 »

COSMIC-FMR1 »

Genecards-FMR1

Protein-protein Interactions for FMR1

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait BAG2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait BCLAF1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CCDC9	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait DENND6A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait GBA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait KIF5B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MTX1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MZT1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RPL10	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SART3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SNCA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait STMN1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait THOC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TUBG1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait UBA6	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait UBE2I	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FMR1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FXR2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait WBP2NL	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in FMR1

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring FMR1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring FMR1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0003723	RNA binding	Database	INF
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005654	nucleoplasm	Database	INF
Category members	GO Category	GO:0005730	nucleolus	Database	13.38
Category members	GO Category	GO:0005737	cytoplasm	Database	12.81
Category members	GO Category	GO:0051028	mRNA transport	Database	1.7
Category members	GO Category	GO:0003729	mRNA binding	Database	1.38
Category members	GO Category	GO:0010494	cytoplasmic stress granule	Database	1.32
Category members	GO Category	GO:0043198	dendritic shaft	Database	0.93
Category members	GO Category	GO:0043197	dendritic spine	Database	0.86
Category members	GO Category	GO:0042788	polysomal ribosome	Database	0.28
Category members	GO Category	GO:0045202	synapse	Database	0.06
Category members	GO Category	GO:0005845	mRNA cap binding complex	Database	0
Category members	GO Category	GO:0007417	central nervous system development	Database	0
Category members	GO Category	GO:0045947	negative regulation of translational initiation	Database	0
Category members	GO Category	GO:0071598	neuronal ribonucleoprotein granule	Database	0