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Query: DDX47

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
DDX47 0 0.498 -0.690 0.360 -1.395 -0.368 -0.261 -0.050

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
DDX47 Phosphorylation S14 1.136 0.816 _(ac)AAPEEHDSPTEAS(ph)QPIVEEEETK_
DDX47 Phosphorylation T11 1.396 -0.790 _(ac)AAPEEHDS(ph)PT(ph)EASQPIVEEEETK_
DDX47 Phosphorylation S9 -0.708 -0.879 _(ac)AAPEEHDS(ph)PT(ph)EASQPIVEEEETK_

Background Information for DDX47:


Pubmed-DDX47 »
Uniprot-DDX47 »
Biogrid-DDX47 »
ProteomicsDB-DDX47 »

Tumorportal-DDX47 »
COSMIC-DDX47 »
GenomeRNAi-DDX47 »
Genecards-DDX47


Protein-protein Interactions for DDX47
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait EIF3A Cat. description Hein, Mann, Cell 2015
Category members IP bait EIF3I Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait RRBP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SRP72 Cat. description Hein, Mann, Cell 2015
Category members IP bait ARIH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NOL10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NOL8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PARVA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WISP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in DDX47
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members Helicase_C IPR001650 2.48
Category members Helicase_ATP-bd IPR014001 2.48
Category members Helicase/UvrB_dom IPR006935 0.78
Category members DEAD/DEAH_box_helicase_dom IPR011545 0.35
Category members RNA_helicase_DEAD_Q_motif IPR014014 0.24


Protein complexes (CORUM database) featuring DDX47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring DDX47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0004386 helicase activity Database 2.49
Category members GO Category GO:0006364 rRNA processing Database 2.47
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0008026 ATP-dependent helicase activity Database 0.79
Category members GO Category GO:0016787 hydrolase activity Database 0.22
Category members GO Category GO:0008625 extrinsic apoptotic signaling pathway via death domain receptors Database 0


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