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Query: COPE

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
COPE 0 -3.330 -0.480 0.880 0.029 -0.141 -0.261 -1.241 -1.183

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
COPE Phosphorylation S13 -0.447 -0.476 _APPAPGPASGGS(ph)GEVDELFDVK_
COPE Ubiquitylation K278 0.224 -0.715 _YLSQLK(gl)DAHR_
COPE Phosphorylation S10 -0.819 _APPAPGPAS(ph)GGSGEVDELFDVK_
COPE Ubiquitylation K288 -0.446 _SHPFIK(gl)EYQAK_

Background Information for COPE:


Pubmed-COPE »
Uniprot-COPE »
Biogrid-COPE »
ProteomicsDB-COPE »

Tumorportal-COPE »
COSMIC-COPE »
GenomeRNAi-COPE »
Genecards-COPE


Protein-protein Interactions for COPE
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait COPA Cat. description Hein, Mann, Cell 2015
Category members IP bait ERP44 Cat. description Hein, Mann, Cell 2015
Category members IP bait KATNA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH6 Cat. description Hein, Mann, Cell 2015
Category members IP bait SACM1L Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC3 Cat. description Hein, Mann, Cell 2015
Category members IP bait COPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in COPE
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Coatomer_esu IPR006822 0


Protein complexes (CORUM database) featuring COPE
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring COPE
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0015031 protein transport Database 3.48
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members GO Category GO:0005198 structural molecule activity Database 0.94
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0006891 intra-Golgi vesicle-mediated transport Database 0.1
Category members GO Category GO:0006890 retrograde vesicle-mediated transport, Golgi to ER Database 0.05
Category members Pathway Pathway_1272 REACTOME_COPI_MEDIATED_TRANSPORT 0 0
Category members GO Category GO:0030126 COPI vesicle coat Database 0
Category members GO Category GO:0030137 COPI-coated vesicle Database 0
Category members GO Category GO:0048205 COPI coating of Golgi vesicle Database 0


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