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Query: CHD1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CHD1 0 2.286 -0.860 0.880 -0.551 0.633 0.179 0.182

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CHD1 Phosphorylation S1677 0.403 0.455 _ASSSGPRS(ph)PLDQR_
CHD1 Phosphorylation S89 0.026 _S(ph)SPSILAVQR_
CHD1 Phosphorylation S90 0.706 -0.009 _SS(ph)PSILAVQR_
CHD1 Ubiquitylation K455 -0.198 _TTPFKDCK(gl)VLK_
CHD1 Ubiquitylation K1320 -1.450 _K(gl)EALSGAGSSK_

Background Information for CHD1:


Pubmed-CHD1 »
Uniprot-CHD1 »
Biogrid-CHD1 »
ProteomicsDB-CHD1 »

Tumorportal-CHD1 »
COSMIC-CHD1 »
GenomeRNAi-CHD1 »
Genecards-CHD1


Protein-protein Interactions for CHD1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATRX Cat. description Hein, Mann, Cell 2015
Category members IP bait CBX1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CUL4A Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait MAD2L2 Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait TMPO Cat. description Hein, Mann, Cell 2015
Category members IP bait TPX2 Cat. description Hein, Mann, Cell 2015


Protein Domains in CHD1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SNF2_N IPR000330 3.38
Category members Chromo_domain/shadow IPR000953 2.84
Category members P-loop_NTPase IPR027417 2.83
Category members Helicase_C IPR001650 2.48
Category members Helicase_ATP-bd IPR014001 2.48
Category members Chromodomain-like IPR016197 2.29
Category members Chromo_domain IPR023780 1.98
Category members Homeodomain-like IPR009057 0


Protein complexes (CORUM database) featuring CHD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CHD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0006338 chromatin remodeling Database 4.95
Category members GO Category GO:0004003 ATP-dependent DNA helicase activity Database 4.66
Category members GO Category GO:0004386 helicase activity Database 2.49
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0035064 methylated histone residue binding Database 0.53
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19


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