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Query: ATG4D

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ATG4D 0 1.238 -1.190 1.270

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ATG4D Phosphorylation S468 0.073 0.285 _AKRPSS(ph)EDFVFL_
ATG4D Ubiquitylation K241 -0.390 _LVELGQSSGK(gl)K_
ATG4D Ubiquitylation K242 -0.390 _LVELGQSSGK(gl)K_

Background Information for ATG4D:


Pubmed-ATG4D »
Uniprot-ATG4D »
Biogrid-ATG4D »
ProteomicsDB-ATG4D »

Tumorportal-ATG4D »
COSMIC-ATG4D »
GenomeRNAi-ATG4D »
Genecards-ATG4D


Protein-protein Interactions for ATG4D
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GOPC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IMPDH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait P4HA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ATG4D
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Peptidase_C54 IPR005078 0


Protein complexes (CORUM database) featuring ATG4D
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ATG4D
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0006915 apoptotic process Database 2.12
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members GO Category GO:0004197 cysteine-type endopeptidase activity Database 0.38
Category members Pathway Pathway_526 KEGG_REGULATION_OF_AUTOPHAGY 0 0
Category members GO Category GO:0006508 proteolysis Database 0
Category members GO Category GO:0006914 autophagy Database 0
Category members GO Category GO:0008234 cysteine-type peptidase activity Database 0


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