bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: APOA1BP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
APOA1BP 0 -0.214 -0.490 0.550

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
APOA1BP Ubiquitylation K288 -0.764 _FVPPALEK(gl)K_
APOA1BP Ubiquitylation K289 -1.396 -0.764 _FVPPALEKK(gl)_

Background Information for APOA1BP:


Pubmed-APOA1BP »
Uniprot-APOA1BP »
Biogrid-APOA1BP »
ProteomicsDB-APOA1BP »

Tumorportal-APOA1BP »
COSMIC-APOA1BP »
GenomeRNAi-APOA1BP »
Genecards-APOA1BP


Protein-protein Interactions for APOA1BP
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in APOA1BP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members YjeF_N_dom IPR004443 0


Protein complexes (CORUM database) featuring APOA1BP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring APOA1BP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005615 extracellular space Database 4.72
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0051289 protein homotetramerization Database 0.44
Category members GO Category GO:0016853 isomerase activity Database 0.37
Category members GO Category GO:0005929 cilium Database 0
Category members GO Category GO:0008150 biological_process Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0044297 cell body Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015