bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: APIP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
APIP 0 -0.653 -0.210 -0.260
APIP 0 -0.653 1.370 -0.480

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
APIP Phosphorylation S104 -0.232 -0.421 _DISGPS(ph)PSK_

Background Information for APIP:


Pubmed-APIP »
Uniprot-APIP »
Biogrid-APIP »
ProteomicsDB-APIP »

Tumorportal-APIP »
COSMIC-APIP »
GenomeRNAi-APIP »
Genecards-APIP


Protein-protein Interactions for APIP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DCTN3 Cat. description Hein, Mann, Cell 2015
Category members IP bait EMC6 Cat. description Hein, Mann, Cell 2015
Category members IP bait NDE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait APIP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ISOC2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in APIP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Aldolase_II/adducin_N IPR001303 0.26


Protein complexes (CORUM database) featuring APIP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring APIP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006915 apoptotic process Database 2.12
Category members GO Category GO:0043066 negative regulation of apoptotic process Database 0.6
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0042802 identical protein binding Database 0.26
Category members GO Category GO:0000096 sulfur amino acid metabolic process Database 0.15
Category members Pathway Pathway_400 KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 0 0.04
Category members GO Category GO:0034641 cellular nitrogen compound metabolic process Database 0.01
Category members Pathway Pathway_17 REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES 0 0
Category members Pathway Pathway_399 REACTOME_SULFUR_AMINO_ACID_METABOLISM 0 0
Category members Pathway Pathway_401 REACTOME_METABOLISM_OF_POLYAMINES 0 0
Category members GO Category GO:0006595 polyamine metabolic process Database 0
Category members GO Category GO:0019509 L-methionine salvage from methylthioadenosine Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0070372 regulation of ERK1 and ERK2 cascade Database 0


.

© Copyright Svejstrup Laboratory 2015