Results for the Category
entrainment of circadian clock by photoperiod
(GO:0043153)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| RBM4B | 1 | -0.900 | 2.520 | 0.658 | 0.120 | |||
| RBM4B | 1 | -0.900 | 2.520 | -0.467 | ||||
| FBXL3 | 0 | -0.990 | 1.600 | |||||
| BHLHE40 | 0 | -0.330 | 0.040 | |||||
| NR2F6 | 0 | 0.150 | 0.370 | -2.474 | ||||
| RBM4 | 0 | -0.070 | 0.200 | 0.658 | 0.120 | |||
| RBM4 | 0 | -0.070 | 0.200 | -0.149 | 0.399 | 0.199 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| BHLHE40 | Ubiquitylation | K159 | -0.521 | _EVLQYLAK(gl)HENTR_ | |
| BHLHE40 | Ubiquitylation | K262 | -1.135 | _SEQPCFK(gl)SDHGR_ | |
| BHLHE40 | Phosphorylation | S383 | -2.162 | _LPS(ph)PLPAHPSVDSSVLLQALKPIPPLNLETKD_ | |
| FBXL3 | Ubiquitylation | K321 | -0.415 | _SVSK(gl)DVLGR_ | |
| NR2F6 | Phosphorylation | S34 | -0.643 | -0.686 | _AAEDDSAS(ph)PPGAASDAEPGDEERPGLQVDCVVCGDK_ |
| NR2F6 | Ubiquitylation | K291 | -0.249 | _AFQEQVDK(gl)LGR_ | |
| RBM4 | Phosphorylation | S86 | 0.208 | 0.329 | _LHVGNIS(ph)PTCTNK_ |
| RBM4 | Phosphorylation | T88 | 0.272 | 0.180 | _LHVGNISPT(ph)CTNK_ |
| RBM4 | Ubiquitylation | K92 | -1.041 | _LHVGNISPTCTNK(gl)ELR_ | |
| RBM4 | Ubiquitylation | K139 | 0.371 | 0.223 | _GLDNTEFQGK(gl)R_ |
| RBM4B | Phosphorylation | S86 | 0.371 | _LHVGNIS(ph)PTCTNQELR_ |
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