bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
ear morphogenesis
(GO:0042471)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
NIPBL 2 -0.180 -0.270
NIPBL 2 -0.180 -0.270 1.066 1.181
NIPBL 2 -0.180 -0.270 0.759 0.809 0.590
EYA1 0 -0.440 -0.140
WDR19 0 -0.150 -0.220
CHD7 0 0.220 -0.050 -1.168 0.026 0.297

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CHD7 Phosphorylation S557 -0.452 _VPVHQHS(ph)PSEPFLEKPVPDM(ox)TQVSGPNAQLVK_
CHD7 Phosphorylation S1874 -0.088 -0.155 _TPFKDEIDEFANS(ph)PSEDKEESMEIHATGK_
CHD7 Phosphorylation S2533 -0.792 _RTS(ph)LSAEDAEVTK_
CHD7 Phosphorylation S2559 -0.345 -0.513 _NIPS(ph)PGQLDPDTR_
CHD7 Phosphorylation S2956 0.383 -0.248 _DGETLEGS(ph)DAEESLDK_
EYA1 Ubiquitylation K513 -0.108 _NNVGGLLGPAK(gl)R_
EYA1 Ubiquitylation K587 -1.219 _IGK(gl)ESCFER_
NIPBL Phosphorylation S178 0.767 1.039 _NNTAAETEDDES(ph)DGEDRGGGTSGVR_
NIPBL Phosphorylation S280 0.496 0.816 _SPQPVCS(ph)PAGSEGTPK_
NIPBL Phosphorylation S284 0.172 0.245 _SPQPVCSPAGS(ph)EGTPK_
NIPBL Phosphorylation S305 0.703 _GSRPPLILQSQSLPCS(ph)SPR_
NIPBL Phosphorylation S306 0.689 0.413 _GSRPPLILQSQSLPCSS(ph)PR_
NIPBL Phosphorylation S318 -0.415 -0.625 _DVPPDILLDS(ph)PERK_
NIPBL Phosphorylation S349 0.713 0.649 _AAMYDIIS(ph)SPSKDSTK_
NIPBL Phosphorylation S350 0.226 0.375 _AAMYDIISS(ph)PSK_
NIPBL Phosphorylation S553 2.102 1.878 _VDS(ph)QASITQDSDSIK_
NIPBL Phosphorylation T599 0.308 _STPENHPET(ph)PKKK_
NIPBL Phosphorylation T713 -0.940 -0.779 _GESRPET(ph)PKQK_
NIPBL Ubiquitylation K1628 0.366 _DAVTSK(gl)MDQGSIER_
NIPBL Phosphorylation S2658 0.412 0.260 _AITSLLGGGS(ph)PK_
NIPBL Phosphorylation S2672 0.868 _NNTAAETEDDES(ph)DGEDRGGGTSGSLR_
WDR19 Ubiquitylation K475 0.103 _LFPAVDDK(gl)CR_


© Copyright Svejstrup Laboratory 2015