bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
eye photoreceptor cell development
(GO:0042462)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
CEP290 1 1.020 -0.690
CEP290 1 2.010 -1.090
GNAT1 0 -0.110 -0.270
GNAT1 0 -0.110 -0.270 -0.166 -0.094 0.032 0.420 0.504
RPGR 0 0.230 0.370
PRKCI 0 0.730 -0.460 1.483 0.192 0.350

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CEP290 Ubiquitylation K593 -1.125 _K(gl)LDLLSLK_
CEP290 Ubiquitylation K735 -1.199 _KEAINYSQQLAK(gl)ANLK_
CEP290 Ubiquitylation K830 0.626 _EYLSEK(gl)ETWK_
CEP290 Ubiquitylation K1178 -1.408 _DK(gl)EVESLR_
CEP290 Ubiquitylation K1336 -0.794 _GLEELISTLK(gl)DTK_
CEP290 Ubiquitylation K1552 -0.135 _LNQK(gl)EEVLKK_
CEP290 Ubiquitylation K1682 0.578 _LQLQENHEDEVKK(gl)_
GNAT1 Ubiquitylation K17 0.320 _ELEK(gl)KLK_
GNAT1 Ubiquitylation K18 0.320 _ELEK(gl)KLK_
PRKCI Ubiquitylation K244 0.289 _ESGK(gl)ASSSLGLQDFDLLR_
PRKCI Ubiquitylation K488 -0.090 0.847 _SLSVK(gl)AASVLK_
RPGR Phosphorylation S518 0.494 0.527 _SLKLS(ph)PVQK_
RPGR Phosphorylation S961 0.183 0.559 _RVPS(ph)INQK_


© Copyright Svejstrup Laboratory 2015