bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
histone mRNA 3'-end processing
(GO:0006398)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
CPSF3 0 0.760 -0.720 -0.001 -0.206 0.455 -0.433 0.066
SYMPK 0 -0.610 1.280 -0.489 0.051 -0.040 -0.388 0.104
LSM11 0 1.200 -1.030
SLBP 0 -0.370 0.950
CPSF2 0 0.150 0.340 -0.113 -0.032 0.570 0.441 0.355

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CPSF2 Ubiquitylation K140 -0.692 _FSQIVNLKGK(gl)_
CPSF2 Ubiquitylation K324 -1.406 -1.082 _VPSPK(gl)VVLASQPDLECGFSR_
CPSF2 Ubiquitylation K725 0.157 _LSDFK(gl)QVLLR_
CPSF3 Ubiquitylation K348 0.384 _ELFESWCTDK(gl)R_
CPSF3 Ubiquitylation K428 0.656 0.535 _LK(gl)AALIR_
CPSF3 Ubiquitylation K465 0.422 _NTEAVTLNFRGEKLAK(gl)_
CPSF3 Ubiquitylation K474 -0.536 _VMGFLADKK(gl)PEQGQR_
CPSF3 Ubiquitylation K487 0.072 0.155 _VSGILVK(gl)R_
CPSF3 Ubiquitylation K604 -0.159 _K(gl)LEMHVYSK_
LSM11 Phosphorylation S21 -1.366 -1.012 _SAGAGSPARPPS(ph)PR_
SLBP Phosphorylation S7 -0.777 -0.205 _(ac)ACRPRS(ph)PPR_
SLBP Phosphorylation S59 -1.062 _RPES(ph)FTTPEGPKPR_
SLBP Phosphorylation T62 -1.930 -2.227 _RPESFTT(ph)PEGPKPR_
SLBP Phosphorylation S254 0.730 _HMDS(ph)QVEDEFDLEACLTEPLRDFSAMS_
SYMPK Ubiquitylation K490 -0.556 -1.231 _TESVLIK(gl)R_
SYMPK Phosphorylation S494 0.456 -0.279 _RLS(ph)AQGQAISVVGSLSSMSPLEEEAPQAK_
SYMPK Phosphorylation S501 0.517 -0.005 _RLSAQGQAIS(ph)VVGSLSSMSPLEEEAPQAK_
SYMPK Ubiquitylation K551 -0.114 _LSDVLK(gl)PLTDAQVEAMK_
SYMPK Ubiquitylation K1040 0.447 0.966 _VWEGFIK(gl)CCQR_
SYMPK Phosphorylation S1170 -0.325 _LKPGGVGAPSSS(ph)SPSPSPSAR_
SYMPK Phosphorylation S1171 -0.647 -0.147 _LKPGGVGAPSSSS(ph)PSPSPSAR_
SYMPK Phosphorylation S1173 1.053 -2.091 _LKPGGVGAPSSSSPS(ph)PSPSAR_
SYMPK Phosphorylation T1231 0.104 -0.160 _ET(ph)AAGGLTLKEERSPQTLAPVGEDAMK_
SYMPK Phosphorylation T1237 0.076 _ETAAGGLT(ph)LKEERSPQTLAPVGEDAM(ox)K_
SYMPK Phosphorylation S1243 0.014 -0.294 _S(ph)PQTLAPVGEDAM(ox)K_
SYMPK Phosphorylation S1259 -0.172 -1.286 _TPS(ph)PAAEDAREPEAK_


© Copyright Svejstrup Laboratory 2015