bioLOGIC Category
Results for the Category
nucleotide-excision repair, DNA incision, 3'-to lesion
(GO:0006295)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
ERCC1
|
1
|
-1.720
|
3.820
|
|
|
|
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ERCC1
|
1
|
-1.460
|
2.450
|
|
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ERCC5
|
1
|
-2.410
|
5.420
|
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ERCC4
|
0
|
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|
1.257
|
| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
ERCC1
|
Ubiquitylation
|
K162
|
-0.634
|
|
_LQSLGK(gl)NFALR_
|
|
ERCC1
|
Ubiquitylation
|
K243
|
|
-0.245
|
_VTECLTTVK(gl)SVNK_
|
|
ERCC1
|
Ubiquitylation
|
K281
|
|
-1.586
|
_EDLALCPGLGPQK(gl)AR_
|
|
ERCC5
|
Phosphorylation
|
S766
|
-0.289
|
-0.748
|
_LKTEKEPDATPPS(ph)PR_
|
|
ERCC5
|
Phosphorylation
|
S809
|
-0.115
|
0.693
|
_NAPAAVDEGSIS(ph)PR_
|
|
ERCC5
|
Ubiquitylation
|
K858
|
0.818
|
1.193
|
_INSSTENSDEGLK(gl)VR_
|
|
ERCC5
|
Phosphorylation
|
S951
|
-0.018
|
-0.048
|
_ELTPAS(ph)PTCTNSVSK_
|
|
ERCC5
|
Phosphorylation
|
S988
|
0.598
|
1.186
|
_FDSSLLSS(ph)DDETK_
|
© Copyright Svejstrup Laboratory 2015