bioLOGIC Category
Results for the Category
base-excision repair, AP site formation
(GO:0006285)
RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
W |
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Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
TDG
|
1
|
1.400
|
-0.150
|
|
|
|
|
|
NTHL1
|
0
|
0.810
|
-0.080
|
|
|
|
1.191
|
1.167
|
MPG
|
0
|
|
|
0.710
|
|
|
-0.165
|
0.525
|
OGG1
|
0
|
-0.290
|
1.020
|
|
|
|
|
|
CCNO
|
0
|
-0.720
|
0.660
|
|
|
|
|
|
Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
CCNO
|
Phosphorylation
|
S81
|
|
-0.913
|
_GGS(ph)PLPGPAQPVAQLDLQTFR_
|
MPG
|
Ubiquitylation
|
K80
|
0.035
|
|
_SIYFSSPK(gl)GHLTR_
|
MPG
|
Ubiquitylation
|
K210
|
-0.782
|
|
_VLK(gl)DRELCSGPSK_
|
OGG1
|
Ubiquitylation
|
K289
|
|
-2.026
|
_DYSWHPTTSQAK(gl)GPSPQTNK_
|
TDG
|
Ubiquitylation
|
K103
|
|
0.728
|
_ITDTFK(gl)VKR_
|
TDG
|
Ubiquitylation
|
K105
|
|
1.500
|
_ITDTFKVK(gl)_
|
TDG
|
Ubiquitylation
|
K201
|
-0.531
|
0.797
|
_TTPGSK(gl)DLSSK(gl)EFR_
|
TDG
|
Ubiquitylation
|
K206
|
0.334
|
1.024
|
_TTPGSK(gl)DLSSK(gl)EFR_
|
TDG
|
Ubiquitylation
|
K218
|
|
1.203
|
_ILVQK(gl)LQK_
|
TDG
|
Ubiquitylation
|
K221
|
|
1.524
|
_LQK(gl)YQPR_
|
TDG
|
Ubiquitylation
|
K246
|
0.699
|
1.949
|
_EVFGVK(gl)VK_
|
TDG
|
Ubiquitylation
|
K285
|
|
1.047
|
_AQDK(gl)VHYYIK_
|
TDG
|
Ubiquitylation
|
K293
|
|
1.411
|
_LK(gl)DLRDQLK_
|
TDG
|
Ubiquitylation
|
K300
|
|
0.980
|
_DQLK(gl)GIER_
|
© Copyright Svejstrup Laboratory 2015