Results for the Category
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
(GO:0045869)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| APOBEC3F | 0 | -0.400 | 0.970 | -0.141 | 0.306 | 1.390 | 0.929 | |
| INPP5K | 0 | -0.690 | 1.160 | |||||
| HMGA2 | 0 | 0.340 | -0.490 | |||||
| APOBEC3D | 0 | -0.141 | 0.306 | 1.390 | 0.929 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| APOBEC3D | Ubiquitylation | K197 | 0.530 | _GLK(gl)TNFR_ | |
| APOBEC3F | Ubiquitylation | K197 | 0.530 | _GLK(gl)TNFR_ | |
| HMGA2 | Phosphorylation | S44 | -0.564 | -0.762 | _KQQQEPTGEPS(ph)PK_ |
| HMGA2 | Phosphorylation | S105 | -0.055 | -0.046 | _KPAQEETEETSSQES(ph)AEED_ |
| INPP5K | Ubiquitylation | K248 | -0.741 | 0.167 | _LLFPPTYK(gl)FDR_ |
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