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Query: APOBEC3D

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
APOBEC3D 0 2.849 -0.141 0.306 1.390 0.929

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
APOBEC3D Ubiquitylation K197 0.530 _GLK(gl)TNFR_

Background Information for APOBEC3D:


Pubmed-APOBEC3D »
Uniprot-APOBEC3D »
Biogrid-APOBEC3D »
ProteomicsDB-APOBEC3D »

Tumorportal-APOBEC3D »
COSMIC-APOBEC3D »
GenomeRNAi-APOBEC3D »
Genecards-APOBEC3D


Protein-protein Interactions for APOBEC3D
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait APOBEC3D Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in APOBEC3D
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Cytidine_deaminase-like IPR016193 0.07
Category members APOBEC_N IPR013158 0.04
Category members APOBEC_C IPR007904 0


Protein complexes (CORUM database) featuring APOBEC3D
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring APOBEC3D
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0000932 cytoplasmic mRNA processing body Database 0.08
Category members GO Category GO:0051607 defense response to virus Database 0.07
Category members GO Category GO:0045087 innate immune response Database 0.05
Category members GO Category GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines Database 0.04
Category members GO Category GO:0010529 negative regulation of transposition Database 0.01
Category members GO Category GO:0045869 negative regulation of single stranded viral RNA replication via double stranded DNA intermediate Database 0
Category members GO Category GO:0070383 DNA cytosine deamination Database 0


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