RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TOP1	3	0.970	-0.880
TOP1	3	0.970	-0.880	0.567	0.872	1.232	0.631	0.425
SFPQ	1	-1.880	4.270	0.328	0.568	-0.141	-0.140	0.032
NONO	0	-1.510	2.340	-0.053	0.223	-0.198	-0.033	-0.027
NONO	0	-1.510	2.340

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
NONO	Ubiquitylation	K5	0.390	-0.727	_(ac)MQSNK(gl)TFNLEK_
NONO	Ubiquitylation	K11	0.290	-1.060	_TFNLEK(gl)QNHTPR_
NONO	Ubiquitylation	K68	-0.317		_KPGEK(gl)TFTQR_
NONO	Ubiquitylation	K96	0.095	-0.745	_KLFEK(gl)YGK_
NONO	Ubiquitylation	K99	0.301	-1.179	_YGK(gl)AGEVFIHK_
NONO	Ubiquitylation	K107		-1.009	_AGEVFIHK(gl)DK_
NONO	Ubiquitylation	K109	0.479	0.300	_DK(gl)GFGFIR_
NONO	Ubiquitylation	K190	-1.285	-2.164	_GRPSGK(gl)GIVEFSGKPAAR_
NONO	Ubiquitylation	K198	0.167	-0.607	_GIVEFSGK(gl)PAAR_
NONO	Ubiquitylation	K243	0.302	-1.020	_LVIK(gl)NQQFHK_
NONO	Ubiquitylation	K272	0.498		_WK(gl)ALIEMEK_
NONO	Ubiquitylation	K279	0.027	-0.480	_ALIEMEK(gl)QQQDQVDR_
NONO	Ubiquitylation	K336	0.158	-0.998	_MEELHNQEVQK(gl)R_
NONO	Ubiquitylation	K371	-0.098	-0.962	_RQQEGFK(gl)GTFPDAR_
NONO	Phosphorylation	T428		-2.034	_GAM(ox)PPAPVPAGTPAPPGPATMMPDGTLGLT(ph)PPTTER_
NONO	Phosphorylation	T450	0.010	-0.660	_FGQAATM(ox)EGIGAIGGT(ph)PPAFNR_
NONO	Ubiquitylation	K467	-0.128	-0.646	_AAPGAEFAPNK(gl)R_
SFPQ	Ubiquitylation	K271	0.191		_SEEK(gl)ISDSEGFK_
SFPQ	Phosphorylation	S273	0.863	0.625	_SEEKIS(ph)DSEGFK_
SFPQ	Ubiquitylation	K291	0.067		_RPGEK(gl)TYTQR_
SFPQ	Ubiquitylation	K330	0.013		_YGEPGEVFINK(gl)GK_
SFPQ	Ubiquitylation	K332	1.002	1.454	_GK(gl)GFGFIK_
SFPQ	Ubiquitylation	K338	0.958		_GFGFIK(gl)LESR_
SFPQ	Ubiquitylation	K413	0.957	0.529	_STGK(gl)GIVEFASKPAAR_
SFPQ	Ubiquitylation	K421	0.383	1.058	_GIVEFASK(gl)PAAR_
SFPQ	Ubiquitylation	K466	-0.093	1.182	_LAQK(gl)NPMYQK_
SFPQ	Ubiquitylation	K559	-0.148	0.186	_MEELHNQEMQK(gl)R_
SFPQ	Phosphorylation	T687		-1.833	_GMGPGT(ph)PAGYGR_
TOP1	Phosphorylation	S10	0.973	1.937	_(ac)SGDHLHNDS(ph)QIEADFR_
TOP1	Ubiquitylation	K245	2.277		_FYYDGK(gl)VMK_
TOP1	Ubiquitylation	K252		1.900	_LSPK(gl)AEEVATFFAK_
TOP1	Ubiquitylation	K391	0.019		_DAK(gl)VPSPPPGHK_
TOP1	Ubiquitylation	K545	2.178		_YYNKVPVEK(gl)R_
TOP1	Ubiquitylation	K642	2.317		_TFEK(gl)SMMNLQTK_