bioLOGIC Category
Results for the Category
NPC subcomplex (NUP98, NUP107, NUP133, NUP160)
(1347)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
NUP160
|
1
|
0.710
|
-0.580
|
0.102
|
|
|
0.750
|
0.409
|
|
NUP133
|
1
|
-2.070
|
3.890
|
0.594
|
|
|
0.654
|
0.495
|
|
NUP107
|
1
|
-0.360
|
0.090
|
1.044
|
|
|
1.191
|
0.635
|
|
NUP98
|
0
|
0.500
|
-0.570
|
0.947
|
|
|
0.625
|
0.455
|
| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
NUP107
|
Phosphorylation
|
S10
|
|
-0.711
|
_SGFGEIS(ph)SPVIR_
|
|
NUP107
|
Phosphorylation
|
S11
|
0.862
|
-0.338
|
_SGFGEISS(ph)PVIR_
|
|
NUP107
|
Phosphorylation
|
S37
|
1.056
|
1.500
|
_VLLQAS(ph)QDENFGNTTPR_
|
|
NUP107
|
Phosphorylation
|
S86
|
|
-0.188
|
_QPDISCILGTGGKS(ph)PR_
|
|
NUP107
|
Ubiquitylation
|
K201
|
-0.019
|
-0.024
|
_ATPGLQK(gl)FSK_
|
|
NUP107
|
Ubiquitylation
|
K501
|
|
-0.933
|
_VFEELQATDK(gl)KR_
|
|
NUP107
|
Ubiquitylation
|
K502
|
0.212
|
-0.572
|
_VFEELQATDKK(gl)R_
|
|
NUP107
|
Ubiquitylation
|
K690
|
1.065
|
0.011
|
_AEALK(gl)QGNAIMR_
|
|
NUP107
|
Ubiquitylation
|
K814
|
|
0.231
|
_GHLDALTADVK(gl)EK_
|
|
NUP133
|
Phosphorylation
|
S45
|
|
-1.170
|
_KGLPLGSAVSS(ph)PVLFS(ph)PVGR_
|
|
NUP133
|
Phosphorylation
|
S50
|
|
-1.836
|
_KGLPLGSAVSS(ph)PVLFS(ph)PVGR_
|
|
NUP133
|
Ubiquitylation
|
K842
|
1.012
|
0.247
|
_YDNLEM(ox)EYLQK(gl)R_
|
|
NUP133
|
Ubiquitylation
|
K910
|
|
-0.319
|
_WYLEKGK(gl)_
|
|
NUP133
|
Ubiquitylation
|
K1050
|
|
-0.275
|
_ANEYDFKK(gl)_
|
|
NUP133
|
Ubiquitylation
|
K1076
|
|
-0.262
|
_LEILCK(gl)ALQR_
|
|
NUP133
|
Ubiquitylation
|
K1107
|
0.694
|
|
_ILQK(gl)LLK_
|
|
NUP133
|
Ubiquitylation
|
K1110
|
-0.210
|
-0.014
|
_LLK(gl)DGIQLSEYLPEVK_
|
|
NUP160
|
Ubiquitylation
|
K495
|
|
1.512
|
_NLDLSWSELK(gl)K_
|
|
NUP160
|
Ubiquitylation
|
K608
|
|
0.719
|
_DVICLIK(gl)CLR_
|
|
NUP160
|
Ubiquitylation
|
K722
|
0.792
|
-0.766
|
_GVHK(gl)IASTR_
|
|
NUP160
|
Ubiquitylation
|
K965
|
-0.377
|
0.302
|
_LQYYDK(gl)VLR_
|
|
NUP160
|
Phosphorylation
|
S1157
|
-0.698
|
-0.399
|
_LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK_
|
|
NUP98
|
Phosphorylation
|
S612
|
0.512
|
0.471
|
_NLNNSNLFS(ph)PVNR_
|
|
NUP98
|
Phosphorylation
|
S623
|
0.489
|
0.151
|
_DSENLAS(ph)PSEYPENGER_
|
|
NUP98
|
Phosphorylation
|
T670
|
0.107
|
-0.276
|
_PIPQT(ph)PESAGNK_
|
|
NUP98
|
Ubiquitylation
|
K757
|
0.216
|
0.390
|
_ITNEK(gl)GECIVSDFTIGR_
|
|
NUP98
|
Ubiquitylation
|
K831
|
-1.112
|
|
_KAEVTLDGVWPTDK(gl)TSR_
|
|
NUP98
|
Phosphorylation
|
S888
|
0.233
|
0.103
|
_YGLQDS(ph)DEEEEEHPSK_
|
|
NUP98
|
Phosphorylation
|
S934
|
-0.774
|
-0.738
|
_PAPPPQSQS(ph)PEVEQLGR_
|
|
NUP98
|
Ubiquitylation
|
K1019
|
-0.535
|
-1.181
|
_LPSK(gl)ADTSQEICSPR_
|
|
NUP98
|
Ubiquitylation
|
K1040
|
-0.003
|
|
_LPISASHSSK(gl)TR_
|
|
NUP98
|
Ubiquitylation
|
K1341
|
0.428
|
|
_NSPVEAVFSYLTGK(gl)R_
|
|
NUP98
|
Ubiquitylation
|
K1608
|
0.191
|
-1.283
|
_ETFLTQK(gl)LR_
|
© Copyright Svejstrup Laboratory 2015