bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: NUP160

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NUP160 1 2.468 0.710 -0.580 0.102 0.750 0.409

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NUP160 Ubiquitylation K495 1.512 _NLDLSWSELK(gl)K_
NUP160 Ubiquitylation K608 0.719 _DVICLIK(gl)CLR_
NUP160 Ubiquitylation K965 -0.377 0.302 _LQYYDK(gl)VLR_
NUP160 Phosphorylation S1157 -0.698 -0.399 _LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK_
NUP160 Ubiquitylation K722 0.792 -0.766 _GVHK(gl)IASTR_

Background Information for NUP160:


Pubmed-NUP160 »
Uniprot-NUP160 »
Biogrid-NUP160 »
ProteomicsDB-NUP160 »

Tumorportal-NUP160 »
COSMIC-NUP160 »
GenomeRNAi-NUP160 »
Genecards-NUP160


Protein-protein Interactions for NUP160
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KPNB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP107 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP153 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP214 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP98 Cat. description Hein, Mann, Cell 2015
Category members IP bait RANBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait RCC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SEH1L Cat. description Hein, Mann, Cell 2015
Category members IP bait UBE2I Cat. description Hein, Mann, Cell 2015
Category members IP bait C19orf75 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CD70 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NUP43 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SEC13 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM206 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UXS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VASN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF785 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in NUP160
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Nucleoporin_Nup160 IPR021717 0.35


Protein complexes (CORUM database) featuring NUP160
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 87 Nup 107-160 subcomplex Database 1.16
Category members Corum 1347 NPC subcomplex (NUP98, NUP107, NUP133, NUP160) Database 1.15


Categories featuring NUP160
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0000278 mitotic cell cycle Database 10.63
Category members GO Category GO:0005635 nuclear envelope Database 7.22
Category members GO Category GO:0005643 nuclear pore Database 6.58
Category members GO Category GO:0010827 regulation of glucose transport Database 5.83
Category members GO Category GO:0007077 mitotic nuclear envelope disassembly Database 5.8
Category members GO Category GO:0008645 hexose transport Database 4.15
Category members GO Category GO:0006406 mRNA export from nucleus Database 4.09
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0000776 kinetochore Database 2.24
Category members GO Category GO:0015758 glucose transport Database 2.09
Category members GO Category GO:0031080 nuclear pore outer ring Database 1.57
Category members GO Category GO:0005487 nucleocytoplasmic transporter activity Database 0.79
Category members GO Category GO:0019221 cytokine-mediated signaling pathway Database 0.44
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07


.

© Copyright Svejstrup Laboratory 2015