bioLOGIC Category
Results for the Category
Ubiquitin E3 ligase (DET1, DDB1, CUL4A, RBX1, COP1)
(1214)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
DDB1
|
3
|
-1.620
|
2.560
|
0.925
|
1.008
|
1.640
|
0.761
|
0.768
|
|
CUL4A
|
2
|
-0.750
|
1.080
|
0.255
|
2.640
|
2.785
|
0.765
|
0.477
|
|
RBX1
|
0
|
0.920
|
-0.940
|
-0.015
|
|
|
-0.422
|
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| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
CUL4A
|
Ubiquitylation
|
K8
|
0.690
|
|
_K(gl)GSFSALVGR_
|
|
CUL4A
|
Phosphorylation
|
S10
|
0.480
|
0.526
|
_KGS(ph)FSALVGR_
|
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CUL4A
|
Ubiquitylation
|
K104
|
0.192
|
|
_VSPMLYK(gl)QLR_
|
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DDB1
|
Ubiquitylation
|
K150
|
-0.646
|
|
_VIPLDRDNK(gl)ELK_
|
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DDB1
|
Ubiquitylation
|
K191
|
|
0.416
|
_HVK(gl)TYEVSLR_
|
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DDB1
|
Ubiquitylation
|
K204
|
1.756
|
|
_EFNK(gl)GPWK_
|
|
DDB1
|
Ubiquitylation
|
K383
|
0.577
|
0.094
|
_QGQGQLVTCSGAFK(gl)EGSLR_
|
|
DDB1
|
Ubiquitylation
|
K484
|
-0.381
|
|
_LVSQEPK(gl)ALVSEWKEPQAK_
|
|
DDB1
|
Ubiquitylation
|
K857
|
0.452
|
-0.214
|
_IVVFQYSDGK(gl)LQTVAEK_
|
|
DDB1
|
Ubiquitylation
|
K1121
|
-0.339
|
1.343
|
_M(ox)QEVVANLQYDDGSGM(ox)K(gl)R_
|
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RBX1
|
Phosphorylation
|
T9
|
|
-0.553
|
_(ac)AAAMDVDT(ph)PSGTNSGAGK_
|
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RBX1
|
Ubiquitylation
|
K19
|
-0.376
|
-0.371
|
_(ac)AAAMDVDTPSGTNSGAGK(gl)KR_
|
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RBX1
|
Ubiquitylation
|
K20
|
-0.541
|
-0.371
|
_(ac)AAAMDVDTPSGTNSGAGKK(gl)R_
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