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Query: VPS54

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VPS54 0 1.274 -0.440 1.050

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VPS54 Phosphorylation S8 0.224 _(ac)ASSHSSS(ph)PVPQGSSSDVFFK_

Background Information for VPS54:





Protein-protein Interactions for VPS54

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait SYN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait UFL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC132 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSSC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS53 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VPS54

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Vacuolar_sorting-assoc_54 IPR019515 0


Protein complexes (CORUM database) featuring VPS54

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring VPS54

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0042147 retrograde transport, endosome to Golgi Database 0.26
Category members GO Category GO:0048873 homeostasis of number of cells within a tissue Database 0.04
Category members GO Category GO:0000938 GARP complex Database 0
Category members GO Category GO:0040007 growth Database 0
Category members GO Category GO:0050881 musculoskeletal movement Database 0
Category members GO Category GO:0060052 neurofilament cytoskeleton organization Database 0


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