bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: USP34

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
USP34 0 1.691 -0.770 0.520

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
USP34 Ubiquitylation K2100 0.809 1.208 _YTFNMVTMMK(gl)EK_
USP34 Ubiquitylation K2102 0.830 0.927 _YTFNMVTMMK(gl)EK_
USP34 Ubiquitylation K3100 -0.232 0.525 _ENIK(gl)LIGGK_
USP34 Ubiquitylation K1968 -0.136 -0.001 _TYTMDK(gl)QPLNTGEQK_
USP34 Phosphorylation S3406 -0.618 -0.249 _DSSIIDPGTEQDLPS(ph)PENSSVK_
USP34 Ubiquitylation K1564 -0.718 _TWPGK(gl)SR_

Background Information for USP34:


Pubmed-USP34 »
Uniprot-USP34 »
Biogrid-USP34 »
ProteomicsDB-USP34 »

Tumorportal-USP34 »
COSMIC-USP34 »
GenomeRNAi-USP34 »
Genecards-USP34


Protein-protein Interactions for USP34
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CSNK1A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EIF3M Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EPHA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ERMAP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LYPD4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SUV39H1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPYL6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF211 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF214 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF354C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF550 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF669 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF707 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF764 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF785 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in USP34
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26
Category members UCH/PAN2 IPR028889 0.62
Category members Peptidase_C19_UCH IPR001394 0.53


Protein complexes (CORUM database) featuring USP34
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring USP34
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005488 binding Database 9.32
Category members GO Category GO:0006511 ubiquitin-dependent protein catabolic process Database 3.57
Category members GO Category GO:0004843 ubiquitin-specific protease activity Database 3.28
Category members GO Category GO:0004221 ubiquitin thiolesterase activity Database 1.36
Category members GO Category GO:0071108 protein K48-linked deubiquitination Database 0.88
Category members GO Category GO:0004197 cysteine-type endopeptidase activity Database 0.38
Category members GO Category GO:0016055 Wnt signaling pathway Database 0.11


.

© Copyright Svejstrup Laboratory 2015