bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: UBP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
UBP1 1 0.659 2.130 -1.040 0.257 0.528 -0.126

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for UBP1:





Protein-protein Interactions for UBP1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CLASP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ANKRD29 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EVL Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM19A3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GK Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MTHFD2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRMT6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STK35 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TFCP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in UBP1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members CP2 IPR007604 0.01
Category members SAM/pointed IPR013761 0


Protein complexes (CORUM database) featuring UBP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring UBP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0019079 viral genome replication Database 0.22
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19
Category members GO Category GO:0001525 angiogenesis Database 0
Category members GO Category GO:0003714 transcription corepressor activity Database 0


© Copyright Svejstrup Laboratory 2015