bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TRIM44

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TRIM44 0 0.319 -0.490 -0.080

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TRIM44 Ubiquitylation K314 -0.266 -0.257 _LMTQMAQAK(gl)EQLDTSNESAEPK_
TRIM44 Ubiquitylation K265 0.656 _MFIQQEFKK(gl)_
TRIM44 Ubiquitylation K268 0.466 _VQK(gl)VIADEEQK_

Background Information for TRIM44:





Protein-protein Interactions for TRIM44

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TRIM10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM17 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM44 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TRIM44

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_B-box IPR000315 0


Protein complexes (CORUM database) featuring TRIM44

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TRIM44

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29


© Copyright Svejstrup Laboratory 2015