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Query: TRIM4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TRIM4 1 3.870 2.400 -1.130 1.184 0.930 0.247 1.175 0.632

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TRIM4 Ubiquitylation K247 0.266 0.613 _LNQTIASLK(gl)K_
TRIM4 Ubiquitylation K248 0.048 _LNQTIASLKK(gl)_
TRIM4 Ubiquitylation K290 -0.993 _SEIQDVNYSLEAVKVK(gl)_

Background Information for TRIM4:


Pubmed-TRIM4 »
Uniprot-TRIM4 »
Biogrid-TRIM4 »
ProteomicsDB-TRIM4 »

Tumorportal-TRIM4 »
COSMIC-TRIM4 »
GenomeRNAi-TRIM4 »
Genecards-TRIM4


Protein-protein Interactions for TRIM4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ANAPC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait FPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LTBR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB31 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB39B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM69 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TRIM4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_B-box IPR000315 0
Category members Znf_RING IPR001841 0
Category members B30.2/SPRY IPR001870 0
Category members SPRY_dom IPR003877 0
Category members Butyrophylin IPR003879 0
Category members ConA-like_lec_gl_sf IPR008985 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring TRIM4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TRIM4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0070206 protein trimerization Database 0


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