bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TMX2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TMX2 1 3.645 -0.200 0.310
TMX2 1 3.645 -0.200 0.310 0.350 -0.097

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TMX2 Phosphorylation S288 1.956 0.713 _AGDNIPEEQPVASTPTTVS(ph)DGENKK_
TMX2 Ubiquitylation K193 0.413 _YNCTGLNFGK(gl)VDVGR_
TMX2 Ubiquitylation K144 0.407 _YFNDK(gl)TIDEELER_

Background Information for TMX2:





Protein-protein Interactions for TMX2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ACCN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CNGA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNA5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNK16 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTH1R Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC4A8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SRPRB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TLR5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMX2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNRF4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TMX2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Thioredoxin_domain IPR013766 0.49
Category members Thioredoxin-like_fold IPR012336 0.16


Protein complexes (CORUM database) featuring TMX2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TMX2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0045454 cell redox homeostasis Database 0.05
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0008150 biological_process Database 0


© Copyright Svejstrup Laboratory 2015