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Query: TGDS

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TGDS 0 0.241 -0.720 0.410

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TGDS Ubiquitylation K67 -0.169 _NLETISNK(gl)QNYK_

Background Information for TGDS:


Pubmed-TGDS »
Uniprot-TGDS »
Biogrid-TGDS »
ProteomicsDB-TGDS »

Tumorportal-TGDS »
COSMIC-TGDS »
GenomeRNAi-TGDS »
Genecards-TGDS


Protein-protein Interactions for TGDS
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TGDS Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TGDS
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Epimerase_deHydtase_N IPR001509 0
Category members 3Beta_OHSteriod_DH/Estase IPR002225 0
Category members Polysac_CapD-like IPR003869 0
Category members dTDP_dehydrorham_reduct IPR005913 0
Category members Male_sterile_NAD-bd IPR013120 0


Protein complexes (CORUM database) featuring TGDS
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TGDS
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Database 0.29
Category members GO Category GO:0006694 steroid biosynthetic process Database 0.29
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0009058 biosynthetic process Database 0.11
Category members GO Category GO:0044237 cellular metabolic process Database 0.08
Category members GO Category GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Database 0
Category members GO Category GO:0008831 dTDP-4-dehydrorhamnose reductase activity Database 0
Category members GO Category GO:0045226 extracellular polysaccharide biosynthetic process Database 0
Category members GO Category GO:0050662 coenzyme binding Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


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