bioLOGIC-db

bioLOGIC Data

Query: TAF1C

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
TAF1C	0	1.282	-1.030	2.200

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
TAF1C	Ubiquitylation	K434	-0.538	-0.380	_LGAEASCQK(gl)GER_

ProteomicsDB-TAF1C »

Protein-protein Interactions for TAF1C

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait NAF1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait POLR1A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TBCK	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TBP;TBPL2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CCT7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait EAF1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MECP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait P4HA2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RBM34	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPL14	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPL18A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPL37A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPS14	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RRP8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF1B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF1D	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TRIM44	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in TAF1C

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	WD40_repeat_dom	IPR017986	1.39

Protein complexes (CORUM database) featuring TAF1C

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	5727	TBP-TAF complex	Database	0.13

Categories featuring TAF1C

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005654	nucleoplasm	Database	INF
Category members	GO Category	GO:0010467	gene expression	Database	INF
Category members	Pathway	Pathway_348	REACTOME_TRANSCRIPTION	0	9
Category members	Pathway	Pathway_351	REACTOME_RNA_POL_I_TRANSCRIPTION	0	8.31
Category members	Pathway	Pathway_350	REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION	0	7.97
Category members	Pathway	Pathway_346	REACTOME_RNA_POL_I_TRANSCRIPTION_INITIATION	0	3.42
Category members	GO Category	GO:0006360	transcription from RNA polymerase I promoter	Database	2.66
Category members	GO Category	GO:0006361	transcription initiation from RNA polymerase I promoter	Database	2.41
Category members	Pathway	Pathway_345	REACTOME_RNA_POL_I_TRANSCRIPTION_TERMINATION	0	1.9
Category members	GO Category	GO:0006363	termination of RNA polymerase I transcription	Database	1.71
Category members	GO Category	GO:0003677	DNA binding	Database	1.53
Category members	GO Category	GO:0006362	transcription elongation from RNA polymerase I promoter	Database	1.47
Category members	GO Category	GO:0006366	transcription from RNA polymerase II promoter	Database	0.96
Category members	GO Category	GO:0006355	regulation of transcription, DNA-dependent	Database	0