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Query: SUB1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SUB1 1 3.023 0.200 -0.090 0.504 1.708 -0.635 -0.243

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SUB1 Phosphorylation S24 -1.193 0.870 _ELVSSSSSGSDS(ph)DSEVDK_
SUB1 Ubiquitylation K60 0.447 0.112 _ALSSSK(gl)QSSSSRDDNMFQIGK_
SUB1 Ubiquitylation K75 0.613 0.073 _DDNMFQIGK(gl)M(ox)R_
SUB1 Ubiquitylation K104 -1.583 -0.083 _EYWMDPEGEMK(gl)PGR_
SUB1 Ubiquitylation K46 -0.067 _QVAPEKPVKK(gl)_
SUB1 Ubiquitylation K87 0.439 _GK(gl)VLIDIR_
SUB1 Ubiquitylation K108 -0.383 _K(gl)GISLNPEQWSQLK_
SUB1 Phosphorylation S125 0.599 _EQIS(ph)DIDDAVR_

Background Information for SUB1:


Pubmed-SUB1 »
Uniprot-SUB1 »
Biogrid-SUB1 »
ProteomicsDB-SUB1 »

Tumorportal-SUB1 »
COSMIC-SUB1 »
GenomeRNAi-SUB1 »
Genecards-SUB1


Protein-protein Interactions for SUB1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KCTD5 Cat. description Hein, Mann, Cell 2015


Protein Domains in SUB1
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SUB1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1106 TFIIIC containing-TOP1-SUB1 complex Database 0.72
Category members Corum 1028 HNF4A-SUB1 complex Database 0


Categories featuring SUB1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0003697 single-stranded DNA binding Database 4.24
Category members GO Category GO:0003713 transcription coactivator activity Database 3.68
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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