bioLOGIC-db

bioLOGIC Data

Query: STAG1

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
STAG1	0	0.779	0.770	-0.270
STAG1	0	0.779	0.770	-0.270	0.181			-0.065	0.529

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
STAG1	Ubiquitylation	K270	-0.214	0.529	_LELLLQK(gl)R_

ProteomicsDB-STAG1 »

Protein-protein Interactions for STAG1

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait CDCA5	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SMC3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait C19orf75	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CCDC76	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CD274	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CD83	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait EPHA1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait GPR183	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PNKD	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAD21	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TMEM206	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in STAG1

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	ARM-type_fold	IPR016024	9.26
Category members	STAG	IPR013721	0.11

Protein complexes (CORUM database) featuring STAG1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	282	SNF2h-cohesin-NuRD complex	Database	6.11
Category members	Corum	164	Cohesin-SA1 complex	Database	0.62
Category members	Corum	165	Cohesin-SA1 complex	Database	0.62
Category members	Corum	63	Mitotic 14S cohesin 1 complex	Database	0.62

Categories featuring STAG1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0005654	nucleoplasm	Database	INF
Category members	GO Category	GO:0005829	cytosol	Database	INF
Category members	Pathway	Pathway_320	REACTOME_CELL_CYCLE	0	11.08
Category members	GO Category	GO:0000278	mitotic cell cycle	Database	10.63
Category members	GO Category	GO:0005488	binding	Database	9.32
Category members	Pathway	Pathway_884	REACTOME_MEIOTIC_SYNAPSIS	0	7.46
Category members	Pathway	Pathway_319	REACTOME_CHROMOSOME_MAINTENANCE	0	7.37
Category members	Pathway	Pathway_875	REACTOME_MEIOSIS	0	6.39
Category members	Pathway	Pathway_321	REACTOME_MITOTIC_M_M_G1_PHASES	0	5.47
Category members	Pathway	Pathway_323	REACTOME_DNA_REPLICATION	0	5.24
Category members	Pathway	Pathway_317	REACTOME_CELL_CYCLE_MITOTIC	0	4.82
Category members	GO Category	GO:0005694	chromosome	Database	3.87
Category members	GO Category	GO:0000785	chromatin	Database	2.59
Category members	Pathway	Pathway_726	REACTOME_MITOTIC_PROMETAPHASE	0	2.41
Category members	GO Category	GO:0007067	mitosis	Database	2.23
Category members	Pathway	Pathway_866	KEGG_CELL_CYCLE	0	2.13
Category members	GO Category	GO:0000775	chromosome, centromeric region	Database	0.29
Category members	GO Category	GO:0007059	chromosome segregation	Database	0.13
Category members	GO Category	GO:0030054	cell junction	Database	0