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Query: SSR3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SSR3 1 2.454 0.910 -0.680 1.598 0.778

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SSR3 Ubiquitylation K98 -0.630 0.644 _REDAVSK(gl)EVTR_
SSR3 Ubiquitylation K8 -0.566 _GSSK(gl)QQSEEDLLLQDFSR_

Background Information for SSR3:


Pubmed-SSR3 »
Uniprot-SSR3 »
Biogrid-SSR3 »
ProteomicsDB-SSR3 »

Tumorportal-SSR3 »
COSMIC-SSR3 »
GenomeRNAi-SSR3 »
Genecards-SSR3


Protein-protein Interactions for SSR3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ASPM Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP44 Cat. description Hein, Mann, Cell 2015
Category members IP bait CHORDC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait DYNC1LI1 Cat. description Hein, Mann, Cell 2015
Category members IP bait EPHA2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ITGB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH14 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCDHB15 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP2CA Cat. description Hein, Mann, Cell 2015
Category members IP bait PRMT7 Cat. description Hein, Mann, Cell 2015
Category members IP bait ROCK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SLC6A8 Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBG1 Cat. description Hein, Mann, Cell 2015
Category members IP bait USP43 Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC3 Cat. description Hein, Mann, Cell 2015
Category members IP bait YIPF5 Cat. description Hein, Mann, Cell 2015
Category members IP bait ZWINT Cat. description Hein, Mann, Cell 2015


Protein Domains in SSR3
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SSR3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SSR3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Pathway Pathway_456 REACTOME_TRANSLATION 0 INF
Category members Pathway Pathway_459 REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE 0 INF
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0006614 SRP-dependent cotranslational protein targeting to membrane Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members GO Category GO:0005784 Sec61 translocon complex Database 0.43
Category members GO Category GO:0006613 cotranslational protein targeting to membrane Database 0.31
Category members GO Category GO:0030176 integral to endoplasmic reticulum membrane Database 0


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