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Query: SRBD1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SRBD1 0 3.156 -0.600 1.380 0.625 0.580 0.539 0.032

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for SRBD1:


Pubmed-SRBD1 »
Uniprot-SRBD1 »
Biogrid-SRBD1 »
ProteomicsDB-SRBD1 »

Tumorportal-SRBD1 »
COSMIC-SRBD1 »
GenomeRNAi-SRBD1 »
Genecards-SRBD1


Protein-protein Interactions for SRBD1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FBXO21 Cat. description Hein, Mann, Cell 2015
Category members IP bait GTF3C4 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait LYPLAL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait NAA50 Cat. description Hein, Mann, Cell 2015
Category members IP bait ARHGAP22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ARIH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCDC59 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CROCC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MECP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPL18A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RRP8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SRBD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM44 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZBTB48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZC3HC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SRBD1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NA-bd_OB-fold IPR012340 4.37
Category members Rbsml_prot_S1_RNA-bd_dom IPR003029 0.15
Category members S1_dom IPR022967 0.15
Category members YqgF/RNaseH-like_dom IPR006641 0
Category members RuvA_2-like IPR010994 0


Protein complexes (CORUM database) featuring SRBD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SRBD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0006139 nucleobase-containing compound metabolic process Database 0.08
Category members GO Category GO:0016788 hydrolase activity, acting on ester bonds Database 0


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