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Query: SOX13

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SOX13 0 0.765 -0.360 0.340

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SOX13 Phosphorylation S335 -0.275 -0.329 _DLQSS(ph)PPSLPLGFLGEGDAVTK_
SOX13 Phosphorylation S334 -0.388 _DLQS(ph)SPPSLPLGFLGEGDAVTK_
SOX13 Phosphorylation S386 0.754 _DLISLDSS(ph)PAK_

Background Information for SOX13:


Pubmed-SOX13 »
Uniprot-SOX13 »
Biogrid-SOX13 »
ProteomicsDB-SOX13 »

Tumorportal-SOX13 »
COSMIC-SOX13 »
GenomeRNAi-SOX13 »
Genecards-SOX13


Protein-protein Interactions for SOX13
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CEP85 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CLEC12A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SOX5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SOX13
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members HMG_box_dom IPR009071 0.31


Protein complexes (CORUM database) featuring SOX13
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SOX13
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0009653 anatomical structure morphogenesis Database 0


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