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Query: SNUPN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNUPN 0 1.669 -0.890 1.620

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNUPN Phosphorylation S392 0.472 _GSSHS(ph)PDHPGCLMEN_
SNUPN Ubiquitylation K96 -0.423 _LLELQKSK(gl)_
SNUPN Ubiquitylation K186 -0.840 _GSTSAYTK(gl)SGYCVNR_
SNUPN Ubiquitylation K265 -1.033 _TK(gl)LNPFK_

Background Information for SNUPN:


Pubmed-SNUPN »
Uniprot-SNUPN »
Biogrid-SNUPN »
ProteomicsDB-SNUPN »

Tumorportal-SNUPN »
COSMIC-SNUPN »
GenomeRNAi-SNUPN »
Genecards-SNUPN


Protein-protein Interactions for SNUPN
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DYNC1LI1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SLC33A1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TOR1AIP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC5 Cat. description Hein, Mann, Cell 2015
Category members IP bait YEATS4 Cat. description Hein, Mann, Cell 2015
Category members IP bait SNRPA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPE Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRPN Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNUPN
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Importin-a_IBB IPR002652 0.44


Protein complexes (CORUM database) featuring SNUPN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1045 Snurportin-CRM1-RanGTP complex Database 0.11


Categories featuring SNUPN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Pathway Pathway_771 REACTOME_METABOLISM_OF_RNA 0 INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members GO Category GO:0016070 RNA metabolic process Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005643 nuclear pore Database 6.58
Category members Pathway Pathway_887 REACTOME_METABOLISM_OF_NON_CODING_RNA 0 4.38
Category members GO Category GO:0006606 protein import into nucleus Database 1.81
Category members GO Category GO:0008565 protein transporter activity Database 0.26
Category members GO Category GO:0000387 spliceosomal snRNP assembly Database 0.04
Category members GO Category GO:0000339 RNA cap binding Database 0
Category members GO Category GO:0034660 ncRNA metabolic process Database 0


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