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Query: SNAPC4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNAPC4 0 0.668 -0.130 -0.220

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNAPC4 Phosphorylation S1400 0.524 0.144 _VGSES(ph)EDEDLLSELELADR_
SNAPC4 Phosphorylation S599 -0.230 _GGAGAWLGGPAASLS(ph)PPKGSSASQGGSK_
SNAPC4 Phosphorylation S1398 0.524 _VGS(ph)ESEDEDLLSELELADR_

Background Information for SNAPC4:


Pubmed-SNAPC4 »
Uniprot-SNAPC4 »
Biogrid-SNAPC4 »
ProteomicsDB-SNAPC4 »

Tumorportal-SNAPC4 »
COSMIC-SNAPC4 »
GenomeRNAi-SNAPC4 »
Genecards-SNAPC4


Protein-protein Interactions for SNAPC4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait NCAPH2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSME3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNAPC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNAPC4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SANT/Myb IPR001005 2.18
Category members Myb-like_dom IPR017877 0.63
Category members Homeodomain-like IPR009057 0


Protein complexes (CORUM database) featuring SNAPC4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 114 SNAPc (small nuclear RNA-activating protein) complex Database 0


Categories featuring SNAPC4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members Pathway Pathway_348 REACTOME_TRANSCRIPTION 0 9
Category members Pathway Pathway_350 REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION 0 7.97
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006366 transcription from RNA polymerase II promoter Database 0.96
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members Pathway Pathway_357 REACTOME_RNA_POL_III_TRANSCRIPTION 0 0.29
Category members GO Category GO:0006383 transcription from RNA polymerase III promoter Database 0.18
Category members Pathway Pathway_352 REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER 0 0.11
Category members GO Category GO:0009301 snRNA transcription Database 0


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