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Query: SNAPC3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNAPC3 0 -1.022 1.720 -1.040

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNAPC3 Ubiquitylation K287 -0.584 -0.438 _GYGK(gl)FQTAR_
SNAPC3 Ubiquitylation K345 -0.643 _TLYPLLIK(gl)K_
SNAPC3 Ubiquitylation K346 -0.643 _TLYPLLIK(gl)K_

Background Information for SNAPC3:


Pubmed-SNAPC3 »
Uniprot-SNAPC3 »
Biogrid-SNAPC3 »
ProteomicsDB-SNAPC3 »

Tumorportal-SNAPC3 »
COSMIC-SNAPC3 »
GenomeRNAi-SNAPC3 »
Genecards-SNAPC3


Protein-protein Interactions for SNAPC3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PSME3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNAPC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNAPC3
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SNAPC3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 114 SNAPc (small nuclear RNA-activating protein) complex Database 0


Categories featuring SNAPC3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members Pathway Pathway_348 REACTOME_TRANSCRIPTION 0 9
Category members Pathway Pathway_350 REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION 0 7.97
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006366 transcription from RNA polymerase II promoter Database 0.96
Category members Pathway Pathway_357 REACTOME_RNA_POL_III_TRANSCRIPTION 0 0.29
Category members GO Category GO:0006383 transcription from RNA polymerase III promoter Database 0.18
Category members Pathway Pathway_352 REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER 0 0.11
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0009301 snRNA transcription Database 0


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