bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SIVA1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SIVA1 0 1.658 1.120 -0.430

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SIVA1 Ubiquitylation K43 -0.412 1.388 _YSQEVFEK(gl)TKR_
SIVA1 Ubiquitylation K124 0.062 _AVDGK(gl)AVCGQCER_
SIVA1 Ubiquitylation K41 0.271 -0.229 _YSQEVFEK(gl)TKR_
SIVA1 Ubiquitylation K17 -1.914 _SCPFADVAPLQLK(gl)VR_

Background Information for SIVA1:


Pubmed-SIVA1 »
Uniprot-SIVA1 »
Biogrid-SIVA1 »
ProteomicsDB-SIVA1 »

Tumorportal-SIVA1 »
COSMIC-SIVA1 »
GenomeRNAi-SIVA1 »
Genecards-SIVA1


Protein-protein Interactions for SIVA1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PCNA Cat. description Hein, Mann, Cell 2015


Protein Domains in SIVA1
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SIVA1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SIVA1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0001618 virus receptor activity Database 0.83
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0006924 activation-induced cell death of T cells Database 0.16
Category members GO Category GO:0032088 negative regulation of NF-kappaB transcription factor activity Database 0.04
Category members GO Category GO:0009615 response to virus Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015