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Query: SEC23IP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SEC23IP 0 1.272 1.130 -0.980

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SEC23IP Ubiquitylation K723 0.169 0.567 _AVAATSTK(gl)GQEQSAQK_
SEC23IP Ubiquitylation K477 0.473 _VVSLK(gl)LLR_
SEC23IP Phosphorylation S926 0.301 0.235 _VVES(ph)PDFSKDEDYLGK_
SEC23IP Ubiquitylation K491 0.029 0.164 _SLDDGK(gl)VSR_
SEC23IP Ubiquitylation K733 -1.878 _TK(gl)DMASLPSESNEPK_
SEC23IP Ubiquitylation K871 0.027 _MGSDLK(gl)QGFISSLK_
SEC23IP Ubiquitylation K931 -0.299 _VVESPDFSK(gl)DEDYLGK_

Background Information for SEC23IP:


Pubmed-SEC23IP »
Uniprot-SEC23IP »
Biogrid-SEC23IP »
ProteomicsDB-SEC23IP »

Tumorportal-SEC23IP »
COSMIC-SEC23IP »
GenomeRNAi-SEC23IP »
Genecards-SEC23IP


Protein-protein Interactions for SEC23IP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KIF4A Cat. description Hein, Mann, Cell 2015
Category members IP bait PRKD2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SEC24C Cat. description Hein, Mann, Cell 2015
Category members IP bait TIMM13 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS28 Cat. description Hein, Mann, Cell 2015
Category members IP bait ARHGAP25 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C6orf141 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DDHD2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPX7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KIAA1683 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LYPD4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NAAA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRMT6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RABL2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SEC31A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP27 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM32 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SEC23IP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members DDHD IPR004177 0.11
Category members SAM IPR001660 0
Category members SAM/pointed IPR013761 0
Category members SAM_type1 IPR021129 0


Protein complexes (CORUM database) featuring SEC23IP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SEC23IP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0005793 endoplasmic reticulum-Golgi intermediate compartment Database 0.74
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0007030 Golgi organization Database 0.13
Category members GO Category GO:0012507 ER to Golgi transport vesicle membrane Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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