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Query: SCML1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SCML1 0 1.022 1.260 -0.150

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SCML1 Phosphorylation S238 0.237 0.402 _S(ph)PVENDGYIEEGSITK_
SCML1 Ubiquitylation K325 -0.148 _LKQGK(gl)CFEN_
SCML1 Phosphorylation S150 -0.323 -0.187 _RENNS(ph)PSNLPR_
SCML1 Phosphorylation S218 -0.356 _ADS(ph)IHNTYSTDHASAAPPSVTR_
SCML1 Phosphorylation S138 -0.502 -0.417 _NEVYETFSYPESYS(ph)PTLPVSR_
SCML1 Ubiquitylation K121 0.531 _LKLQK(gl)MK_
SCML1 Phosphorylation T236 -0.494 _ADSIHNTYSTDHASAAPPSVT(ph)RSPVENDGYIEEGSITK_

Background Information for SCML1:





Protein-protein Interactions for SCML1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCDC43 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDH5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR156 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait JPH4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCGF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PHC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSMC3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SCML1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SAM IPR001660 0
Category members SAM_2 IPR011510 0
Category members SAM/pointed IPR013761 0
Category members SAM_type1 IPR021129 0


Protein complexes (CORUM database) featuring SCML1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SCML1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0009653 anatomical structure morphogenesis Database 0


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