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Query: SCFD2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SCFD2 0 -0.060 -0.760 0.720

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SCFD2 Ubiquitylation K375 -0.780 _ENLPIK(gl)MSMGR_

Background Information for SCFD2:





Protein-protein Interactions for SCFD2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ZW10 Cat. description Hein, Mann, Cell 2015
Category members IP bait NAPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RINT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCFD2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SEC22B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SIRT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait USE1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VAMP4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SCFD2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Sec1-like IPR001619 1.02


Protein complexes (CORUM database) featuring SCFD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SCFD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members GO Category GO:0006904 vesicle docking involved in exocytosis Database 0.51
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0008150 biological_process Database 0


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