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Query: SCAF4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SCAF4 3 6.855 0.270 -0.290 3.570 2.330 2.699 -0.849 0.197

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SCAF4 Phosphorylation S656 -0.971 -0.773 _KPENEVAQNGGAETSHTEPVS(ph)PIPK_
SCAF4 Phosphorylation S154 -1.724 -1.792 _IEIIQPLLDM(ox)AAGTSNAAPVAENVTNNEGS(ph)PPPPVK_
SCAF4 Ubiquitylation K119 0.652 _VLNLWQK(gl)NGVFK_

Background Information for SCAF4:


Pubmed-SCAF4 »
Uniprot-SCAF4 »
Biogrid-SCAF4 »
ProteomicsDB-SCAF4 »

Tumorportal-SCAF4 »
COSMIC-SCAF4 »
GenomeRNAi-SCAF4 »
Genecards-SCAF4


Protein-protein Interactions for SCAF4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCNB2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SMEK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HLX Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait JMJD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait QPRT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC13A2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SCAF4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members RNA_pol_II-bd IPR006903 2.39
Category members CID_dom IPR006569 1.43
Category members ENTH_VHS IPR008942 0.96


Protein complexes (CORUM database) featuring SCAF4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SCAF4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0003676 nucleic acid binding Database 0.83


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