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Query: RSF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RSF1 2 6.145 -0.030 -0.300 0.280 -0.177 0.656 0.664 0.625

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RSF1 Phosphorylation T408 1.744 2.000 _SVT(ph)PTKEFLKDEIK_
RSF1 Phosphorylation S475 1.316 _FYETKEESYSPS(ph)KDR_
RSF1 Phosphorylation S471 0.625 _FYETKEES(ph)YSPSKDR_
RSF1 Phosphorylation S1345 0.586 0.555 _IES(ph)DEEEDFENVGK_
RSF1 Phosphorylation S473 0.736 0.445 _EESYS(ph)PSKDR_
RSF1 Phosphorylation T1305 -0.092 0.111 _IET(ph)DEEESCDNAHGDANQPAR_
RSF1 Ubiquitylation K215 -2.531 0.017 _AQIDPVLLK(gl)NSSQQDNSSR_
RSF1 Phosphorylation S604 -0.084 -0.114 _TFLDKDAQRLS(ph)PIPEEVPK_
RSF1 Phosphorylation S1359 -0.333 _VGS(ph)PLDYSLVDLPSTNGQS(ph)PGK_
RSF1 Phosphorylation S1375 -0.333 _VGS(ph)PLDYSLVDLPSTNGQS(ph)PGK_
RSF1 Phosphorylation S622 -0.537 -0.508 _STLESEKPGS(ph)PEAAETSPPSNIIDHCEK_
RSF1 Phosphorylation S617 -0.681 -0.594 _STLES(ph)EKPGSPEAAETSPPSNIIDHCEK_
RSF1 Phosphorylation S748 -0.792 -0.682 _KPDS(ph)PPKVLEPENK_
RSF1 Phosphorylation S397 -0.655 -0.787 _LSDDFDS(ph)PVKGPLCK_
RSF1 Ubiquitylation K136 0.337 _YLCECQFDDNLK(gl)FK_

Background Information for RSF1:


Pubmed-RSF1 »
Uniprot-RSF1 »
Biogrid-RSF1 »
ProteomicsDB-RSF1 »

Tumorportal-RSF1 »
COSMIC-RSF1 »
GenomeRNAi-RSF1 »
Genecards-RSF1


Protein-protein Interactions for RSF1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATXN3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CBX1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CHAF1A Cat. description Hein, Mann, Cell 2015
Category members IP bait FBXO21 Cat. description Hein, Mann, Cell 2015
Category members IP bait KAT6A Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF20A Cat. description Hein, Mann, Cell 2015
Category members IP bait MARK2 Cat. description Hein, Mann, Cell 2015
Category members IP bait PSMD6 Cat. description Hein, Mann, Cell 2015
Category members IP bait SHOC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TPX2 Cat. description Hein, Mann, Cell 2015


Protein Domains in RSF1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_FYVE_PHD IPR011011 1.23
Category members Znf_PHD IPR001965 1.15
Category members Znf_PHD-finger IPR019787 0.91


Protein complexes (CORUM database) featuring RSF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 929 CEN complex Database 3.25
Category members Corum 923 SNF2L-RSF1 complex Database 0.35
Category members Corum 921 Remodeling and spacing factor (RSF) complex Database 0.33


Categories featuring RSF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members Pathway Pathway_320 REACTOME_CELL_CYCLE 0 11.08
Category members Pathway Pathway_319 REACTOME_CHROMOSOME_MAINTENANCE 0 7.37
Category members GO Category GO:0006338 chromatin remodeling Database 4.95
Category members GO Category GO:0050434 positive regulation of viral transcription Database 4.8
Category members GO Category GO:0034080 CENP-A containing nucleosome assembly at centromere Database 4.75
Category members Pathway Pathway_1281 REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE 0 4.19
Category members GO Category GO:0006334 nucleosome assembly Database 3.77
Category members GO Category GO:0006352 DNA-dependent transcription, initiation Database 3.76
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0042393 histone binding Database 0.94
Category members GO Category GO:0031213 RSF complex Database 0.33
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0043392 negative regulation of DNA binding Database 0.01
Category members GO Category GO:0016584 nucleosome positioning Database 0


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