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Query: RRP1B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RRP1B 0 1.442 1.440 -0.810 0.280 -0.192 0.373

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RRP1B Phosphorylation S245 0.232 0.389 _VGDGDLS(ph)AEEIPENEVSLRR_
RRP1B Ubiquitylation K198 0.360 _FIDPFCK(gl)IAAK_
RRP1B Phosphorylation S513 -0.434 -0.055 _GS(ph)PTGGAQLLK_
RRP1B Phosphorylation S732 -0.508 -0.201 _TPTSS(ph)PASSPLVAK_
RRP1B Phosphorylation S731 -0.453 -0.306 _TPTS(ph)SPAS(ph)SPLVAK_
RRP1B Phosphorylation S706 -0.797 -0.320 _SILVS(ph)PTGPSR_
RRP1B Phosphorylation T728 -1.022 -0.602 _T(ph)PTSSPAS(ph)SPLVAK_
RRP1B Phosphorylation S735 -0.977 -0.602 _T(ph)PTSSPAS(ph)SPLVAK_
RRP1B Phosphorylation S736 -0.915 -0.909 _TPTSS(ph)PASS(ph)PLVAK_

Background Information for RRP1B:


Pubmed-RRP1B »
Uniprot-RRP1B »
Biogrid-RRP1B »
ProteomicsDB-RRP1B »

Tumorportal-RRP1B »
COSMIC-RRP1B »
GenomeRNAi-RRP1B »
Genecards-RRP1B


Protein-protein Interactions for RRP1B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BAG6;BAT3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CBX1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait SORT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SRP72 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAGEB10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MECP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PPP1CC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPL18A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RRP8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SART3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RRP1B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Nop52 IPR010301 0


Protein complexes (CORUM database) featuring RRP1B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RRP1B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0000792 heterochromatin Database 5.45
Category members GO Category GO:0006364 rRNA processing Database 2.47
Category members GO Category GO:0000791 euchromatin Database 0.01
Category members GO Category GO:0010923 negative regulation of phosphatase activity Database 0
Category members GO Category GO:0030688 preribosome, small subunit precursor Database 0


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