bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: RRBP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RRBP1 0 -0.594 0.260 -0.360 0.114 0.210
RRBP1 0 -0.594 0.260 -0.360 0.464 -0.153

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RRBP1 Phosphorylation S745 -0.844 -0.424 _NTDVAQS(ph)PEAPKQEAPAK_
RRBP1 Phosphorylation S1406 -0.973 _SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK_
RRBP1 Phosphorylation S1407 -1.170 -1.046 _SHVEDGDIAGAPASS(ph)PEAPPAEQDPVQLK_

Background Information for RRBP1:


Pubmed-RRBP1 »
Uniprot-RRBP1 »
Biogrid-RRBP1 »
ProteomicsDB-RRBP1 »

Tumorportal-RRBP1 »
COSMIC-RRBP1 »
GenomeRNAi-RRBP1 »
Genecards-RRBP1


Protein-protein Interactions for RRBP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDK5RAP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait EEF1A1;EEF1A1P5 Cat. description Hein, Mann, Cell 2015
Category members IP bait KTN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAD2L2 Cat. description Hein, Mann, Cell 2015
Category members IP bait RRBP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TMPO Cat. description Hein, Mann, Cell 2015
Category members IP bait EEF1D Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EMILIN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KLHL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPYL6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZWINT Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RRBP1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rib_rcpt_KP IPR007794 0
Category members Ribosome_recyc_fac_dom IPR023584 0


Protein complexes (CORUM database) featuring RRBP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RRBP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0006412 translation Database INF
Category members GO Category GO:0005840 ribosome Database 12.2
Category members DDR Literature pubmedid:TBD1_UV_decreased Elia et al, 2015 UV decreased acetylation events Elia et al. 10.54
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0004872 receptor activity Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0030176 integral to endoplasmic reticulum membrane Database 0


.

© Copyright Svejstrup Laboratory 2015