bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: RPP40

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RPP40 0 0.115 -0.150 0.100 0.015

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for RPP40:





Protein-protein Interactions for RPP40

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C18orf21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MECP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NPM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait POP4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM4B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPP21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPP25 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPP30 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP70 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VTN Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RPP40

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring RPP40

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 123 Rnase/Mrp complex Database 0


Categories featuring RPP40

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008033 tRNA processing Database 0.39
Category members GO Category GO:0004526 ribonuclease P activity Database 0
Category members GO Category GO:0005655 nucleolar ribonuclease P complex Database 0


© Copyright Svejstrup Laboratory 2015