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Query: RFT1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RFT1 0 2.305 -0.670 1.210 0.749 0.436
RFT1 0 2.305 -0.490 1.160 0.749 0.436

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RFT1 Ubiquitylation K241 -0.090 _NGAFINWKEAK(gl)_

Background Information for RFT1:


Pubmed-RFT1 »
Uniprot-RFT1 »
Biogrid-RFT1 »
ProteomicsDB-RFT1 »

Tumorportal-RFT1 »
COSMIC-RFT1 »
GenomeRNAi-RFT1 »
Genecards-RFT1


Protein-protein Interactions for RFT1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FYCO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SKA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TMED2 Cat. description Hein, Mann, Cell 2015
Category members IP bait GPR114 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LYPD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RFT1
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring RFT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RFT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0006488 dolichol-linked oligosaccharide biosynthetic process Database 0.28
Category members Pathway Pathway_93 REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN 0 0.18
Category members Pathway Pathway_109 KEGG_N_GLYCAN_BIOSYNTHESIS 0 0.04
Category members Pathway Pathway_94 REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION 0 0
Category members Pathway Pathway_95 REACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION 0 0
Category members GO Category GO:0005319 lipid transporter activity Database 0
Category members GO Category GO:0006869 lipid transport Database 0
Category members GO Category GO:0008643 carbohydrate transport Database 0
Category members GO Category GO:0018279 protein N-linked glycosylation via asparagine Database 0
Category members GO Category GO:0043687 post-translational protein modification Database 0


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