bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: PTGR1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PTGR1 0 0.206 -0.590 0.630

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PTGR1 Ubiquitylation K178 -0.424 _VVGAVGSDEK(gl)VAYLQK_

Background Information for PTGR1:





Protein-protein Interactions for PTGR1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ZNF687 Cat. description Hein, Mann, Cell 2015


Protein Domains in PTGR1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PKS_ER IPR020843 0.22
Category members GroES-like IPR011032 0.09
Category members ADH_C IPR013149 0.02


Protein complexes (CORUM database) featuring PTGR1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PTGR1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Database 0.33
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0036132 13-prostaglandin reductase activity Database 0.13
Category members GO Category GO:0047522 15-oxoprostaglandin 13-oxidase activity Database 0.13
Category members GO Category GO:0004022 alcohol dehydrogenase (NAD) activity Database 0
Category members GO Category GO:0006691 leukotriene metabolic process Database 0
Category members GO Category GO:0009636 response to toxic substance Database 0
Category members GO Category GO:0016491 oxidoreductase activity Database 0
Category members GO Category GO:0019369 arachidonic acid metabolic process Database 0
Category members GO Category GO:0019371 cyclooxygenase pathway Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


© Copyright Svejstrup Laboratory 2015